MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Gemella sp.
GH3.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 258
bases: 1,562,805 bps
CDS: 1,434
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 41
misc RNA:
Total features: 1,482
Total number of protein coding genes annotated/found:
1,434
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Items 1 - 20
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5009|JADGKK010000063.1
SEQF5009_00001
Genome Viewer
NA
AA
459/153
662-204
4-hydroxy-tetrahydrodipicolinate synthase
SEQF5009|JADGKK010000157.1
SEQF5009_00002
Genome Viewer
NA
AA
243/81
616-374
hypothetical protein
SEQF5009|JADGKK010000185.1
SEQF5009_00003
Genome Viewer
NA
AA
2364/788
209-2572
hypothetical protein
SEQF5009|JADGKK010000185.1
SEQF5009_00004
Genome Viewer
NA
AA
1398/466
4056-2659
hypothetical protein
SEQF5009|JADGKK010000185.1
SEQF5009_00005
Genome Viewer
NA
AA
441/147
4489-4049
Zinc-dependent sulfurtransferase SufU
SEQF5009|JADGKK010000185.1
SEQF5009_00006
Genome Viewer
NA
AA
1236/412
5711-4476
Cysteine desulfurase SufS
SEQF5009|JADGKK010000185.1
SEQF5009_00007
Genome Viewer
NA
AA
1296/432
7009-5714
hypothetical protein
SEQF5009|JADGKK010000185.1
SEQF5009_00008
Genome Viewer
NA
AA
741/247
7751-7011
Vegetative protein 296
SEQF5009|JADGKK010000185.1
SEQF5009_00009
Genome Viewer
NA
AA
1185/395
9246-8062
Acetate kinase
SEQF5009|JADGKK010000185.1
SEQF5009_00010
Genome Viewer
NA
AA
1746/582
11106-9361
UvrABC system protein C
SEQF5009|JADGKK010000185.1
SEQF5009_00011
Genome Viewer
NA
AA
1926/642
13104-11179
Serine/threonine-protein kinase PrkC
SEQF5009|JADGKK010000185.1
SEQF5009_00012
Genome Viewer
NA
AA
750/250
13843-13094
Serine/threonine phosphatase stp
SEQF5009|JADGKK010000185.1
SEQF5009_00013
Genome Viewer
NA
AA
1134/378
14954-13821
putative dual-specificity RNA methyltransferase RlmN
SEQF5009|JADGKK010000185.1
SEQF5009_00014
Genome Viewer
NA
AA
1326/442
16279-14954
Ribosomal RNA small subunit methyltransferase B
SEQF5009|JADGKK010000185.1
SEQF5009_00015
Genome Viewer
NA
AA
957/319
17228-16272
Methionyl-tRNA formyltransferase
SEQF5009|JADGKK010000185.1
SEQF5009_00016
Genome Viewer
NA
AA
2343/781
19728-17386
Primosomal protein N'
SEQF5009|JADGKK010000185.1
SEQF5009_00017
Genome Viewer
NA
AA
1167/389
20907-19741
Cysteine/Cysteine sulfinic acid decarboxylase
SEQF5009|JADGKK010000185.1
SEQF5009_00018
Genome Viewer
NA
AA
306/102
21231-20926
Cell cycle protein GpsB
SEQF5009|JADGKK010000185.1
SEQF5009_00019
Genome Viewer
NA
AA
747/249
21994-21248
Ribosomal RNA small subunit methyltransferase E
SEQF5009|JADGKK010000185.1
SEQF5009_00020
Genome Viewer
NA
AA
1248/416
22175-23422
LL-diaminopimelate aminotransferase
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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